FastQCFastQC Report
Mon 25 Mar 2013
108.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 108.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 39346406
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 1940660 4.932242096012531 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1588471 4.0371438245211015 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 1512861 3.8449788781216765 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 1104485 2.8070797622532537 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 974347 2.476330366743026 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 926141 2.353813458845517 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 841346 2.138304576026588 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 744420 1.8919644147422259 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 732870 1.8626097641548254 No Hit
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 639753 1.6259502837438315 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 616261 1.5662447035187914 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 570672 1.450378974892904 RNA PCR Primer, Index 1 (100% over 25bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 516674 1.313141535722475 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGTGGAATTCTCGGGTGCCAAGGAACTCC 473979 1.2046309896766683 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 410545 1.0434116905111994 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 360732 0.9168105468133481 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 358246 0.9104923077345362 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 353734 0.8990249325440295 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 347713 0.8837223913157406 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 325439 0.8271123924253717 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 298046 0.7574923107335394 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGGCTTTGGAATTCTCGGGTGCCAAGGA 286727 0.7287247531578869 RNA PCR Primer, Index 1 (100% over 22bp)
TCTCCCAACCCTTGTACCAGTGTTGGAATTCTCGGGTGCCAAGGAACTC 259122 0.658565867489905 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 257447 0.6543088077726845 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 234519 0.5960366494464577 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 231173 0.5875326961247744 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 228026 0.5795345069127789 RNA PCR Primer, Index 1 (100% over 27bp)
TGCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTG 205862 0.5232040761232424 No Hit
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 199707 0.5075609701175756 RNA PCR Primer, Index 1 (100% over 28bp)
TCTCCCAACCCTTGTACCAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 194506 0.4943424820045826 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 188801 0.4798430636841393 RNA PCR Primer, Index 1 (100% over 26bp)
CTGACCTATGAATTGACAGCCTGGAATTCTCGGGTGCCAAGGAACTCCA 182148 0.4629342766401587 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 174873 0.44444465906238045 RNA PCR Primer, Index 1 (100% over 25bp)
TCAGTGCACTACAGAACTTTGTCTGGAATTCTCGGGTGCCAAGGAACTC 174427 0.4433111374899146 RNA PCR Primer, Index 1 (100% over 26bp)
TCGAGGAGCTCACAGTCTAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 166617 0.42346180233081515 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 157539 0.4003898094275752 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 144275 0.36667897952356815 RNA PCR Primer, Index 1 (100% over 27bp)
AGTGTTTCCTACTTTATGGATGTGGAATTCTCGGGTGCCAAGGAACTCC 142950 0.36331145467263265 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 140993 0.3583376840060055 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 138993 0.35325462762723486 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGATGGAATTCTCGGGTGCCAAGGAACTCCA 135703 0.3448929998841571 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 128254 0.32596115640142587 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTTGGAATTCTCGGGTGCCAAGGAACT 119753 0.30435562526346116 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 119307 0.30322210369099534 RNA PCR Primer, Index 1 (100% over 28bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 117836 0.2994835157244095 No Hit
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 114163 0.2901484826847972 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTC 112564 0.28608457910997004 RNA PCR Primer, Index 1 (100% over 26bp)
TCTCCCAACCCTTGTACCAGTGATGGAATTCTCGGGTGCCAAGGAACTC 112219 0.2852077518846321 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 111882 0.2843512568848093 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 111616 0.28367521038643273 RNA PCR Primer, Index 1 (100% over 25bp)
TTTGTTCGTTCGGCTCGCGTGATGGAATTCTCGGGTGCCAAGGAACTCC 109323 0.2778474862481722 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 108203 0.27500097467606066 RNA PCR Primer, Index 1 (100% over 25bp)
GCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTGC 98183 0.24953486221841967 No Hit
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 92281 0.23453476284466743 RNA PCR Primer, Index 1 (100% over 33bp)
TGTAAACATCCTACACTCTCAGCTTGGAATTCTCGGGTGCCAAGGAACT 90839 0.2308698791955738 RNA PCR Primer, Index 1 (100% over 25bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 88145 0.22402300225336974 RNA PCR Primer, Index 1 (100% over 24bp)
CATAAAGTAGAAAGCACTACTATGGAATTCTCGGGTGCCAAGGAACTCC 81187 0.20633904911162662 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 79743 0.2026690824061542 RNA PCR Primer, Index 1 (100% over 25bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 78345 0.19911602599739353 RNA PCR Primer, Index 1 (100% over 26bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 78008 0.19825953099757068 RNA PCR Primer, Index 6 (100% over 34bp)
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 73965 0.1879841325278858 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 72152 0.18337634192053018 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 66998 0.17027730563243818 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 66295 0.16849061131530033 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGATGGAATTCTCGGGTGCCAAGGAACTCCAG 64407 0.16369220609374083 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 63395 0.16112017956608285 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 62089 0.15780094375074563 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATTCAGGATAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 61909 0.15734346867665625 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 60193 0.15298220630367104 RNA PCR Primer, Index 1 (100% over 26bp)
TGTGCAAATCCATGCAAAACTGTGGAATTCTCGGGTGCCAAGGAACTCC 60030 0.15256793720880124 RNA PCR Primer, Index 1 (100% over 27bp)
ACCCCGTGATGGAACTGAGGATCTGAGGTGGAATTCTCGGGTGCCAAGG 58345 0.14828546220968694 Illumina RNA RT Primer (100% over 21bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 58282 0.14812534593375568 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 57827 0.14696895060758536 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 57296 0.14561939913902175 No Hit
TAGCACCATCTGAAATCGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 57183 0.14533220645362122 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTTGGAATTCTCGGGTGCCAAGGAACT 56876 0.14455195729947992 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCAGCACATAATGGTTTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 55472 0.1409836517215829 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCAGCACATAATGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 54914 0.13956547899190588 RNA PCR Primer, Index 1 (100% over 28bp)
TTCGGAGGATGGCTCATCAAGTGGAATTCTCGGGTGCCAAGGAACTCCA 54886 0.1394943162026031 RNA PCR Primer, Index 1 (100% over 28bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 54466 0.13842687436306128 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 54082 0.13745092753833732 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 54028 0.1373136850161105 RNA PCR Primer, Index 1 (100% over 28bp)
TCAGTGCACTACAGAACTTTGTCTTGGAATTCTCGGGTGCCAAGGAACT 53836 0.1368257116037485 RNA PCR Primer, Index 1 (100% over 25bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 52583 0.1336411767824487 No Hit
TCGAGGAGCTCACAGTCTAGTATGGAATTCTCGGGTGCCAAGGAACTCC 52561 0.13358526316228223 RNA PCR Primer, Index 1 (100% over 27bp)
GTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTCC 52297 0.1329142997202845 RNA PCR Primer, Index 1 (100% over 27bp)
GCATTGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCCA 48837 0.12412061218501126 No Hit
TGAGGTAGTAGTTTGTACAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 48540 0.12336577831276382 RNA PCR Primer, Index 1 (100% over 28bp)
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 48474 0.12319803745226438 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCCAG 48360 0.12290830323867445 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGCTTGGAATTCTCGGGTGCCAAGGAACTCC 48234 0.1225880706868119 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTTTGGAATTCTCGGGTGCCAAGGAACT 47154 0.11984322024227576 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGTGATGATAAAGTATATCTGAGGTGGAATTCTCGGGTGCCAAGGA 47116 0.1197466421710791 RNA PCR Primer, Index 1 (100% over 22bp)
GGAGGTGATGAACTGTCTTACCCTGACCTGGAATTCTCGGGTGCCAAGG 46676 0.11862836976774957 Illumina RNA RT Primer (100% over 21bp)
TTCAAGTAATTCAGGATAGGTTTTGGAATTCTCGGGTGCCAAGGAACTC 45892 0.11663581166727147 RNA PCR Primer, Index 1 (100% over 26bp)
ATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 45837 0.11649602761685526 RNA PCR Primer, Index 1 (100% over 29bp)
AATGACACGATCACTCCCGTTGTGGAATTCTCGGGTGCCAAGGAACTCC 44292 0.11256936656425494 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 43675 0.1110012436714042 RNA PCR Primer, Index 1 (100% over 27bp)
GTAGTGTTTCCTACTTTATGGATTGGAATTCTCGGGTGCCAAGGAACTC 42666 0.1084368417283144 RNA PCR Primer, Index 1 (100% over 26bp)
ACCGGGCGGAAACACCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 42241 0.10735669224782562 RNA PCR Primer, Index 1 (100% over 32bp)
CTAGACTGAAGCTCCTTGAGGATGGAATTCTCGGGTGCCAAGGAACTCC 41498 0.10546833680311234 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCACACAGAAATCGCACCCATTGGAATTCTCGGGTGCCAAGGAACTC 41345 0.10507948299013639 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 40959 0.10409845310903364 RNA PCR Primer, Index 1 (100% over 26bp)
TCAGTGCATCACAGAACTTTGTTTTGGAATTCTCGGGTGCCAAGGAACT 40381 0.10262944981556893 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAAGTTGTATTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 40354 0.10256082855445552 RNA PCR Primer, Index 1 (100% over 27bp)
TGAAAAGTTCGTTCGGGTTTTTTGGAATTCTCGGGTGCCAAGGAACTCC 40325 0.10248712423696334 RNA PCR Primer, Index 1 (100% over 27bp)
CTAGACTGAAGCTCCTTGAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 39644 0.10075634353999194 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCACCATCTGAAATCGGTTATGGAATTCTCGGGTGCCAAGGAACTCC 39378 0.10008029704161545 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 40273660 27.726873 405.0477 28
AATTC 40584530 26.938168 390.44232 26
ATTCT 40094350 25.789614 378.78043 27
TCTCG 40026865 24.916317 366.2423 29
TGCCA 38179520 24.524979 376.16486 36
GCCAA 36130625 23.949667 388.45468 37
CCAAG 36005225 23.866547 388.54355 38
GAACT 38050630 22.836094 351.67767 43
CTCGG 39725940 22.359333 331.01904 30
AACTC 30481965 22.34676 427.58157 44
GAATT 40502695 22.007961 320.23486 25
GTGCC 37708140 21.223635 329.97562 35
GGAAT 40621480 19.957405 289.2912 24
TGGAA 40347345 19.822721 288.95627 23
CAAGG 35883830 19.472027 318.36456 39
GGAAC 34410885 18.672747 318.03732 42
ACTCC 23417995 18.375511 457.38193 45
TCGGG 39228325 18.074772 271.01077 31
CGGGT 38999275 17.969233 270.615 32
AAGGA 35231090 17.861597 297.6224 40
GGTGC 38361490 17.675371 270.41745 34
AGGAA 34596765 17.540005 297.57687 41
GGGTG 38808430 14.638193 221.61919 33
TTGGA 21796755 10.377536 173.07132 22
CTCCA 10410595 8.168933 176.87866 45
TCCAG 8051105 5.171704 77.93705 10
CTTGG 9606250 4.8952465 63.310127 21
CCAGT 6871250 4.4138126 50.155083 7
CTGGA 7589005 3.990721 35.28162 16
TTCAA 5415470 3.5945427 97.47346 1
ACTTG 6063375 3.526375 42.374226 19
GACTG 6056630 3.1849127 66.21069 11
AATCC 4294060 3.1480362 87.48392 8
ATGGA 6353005 3.1212425 48.98998 22
TGTTG 6678745 3.081424 57.17509 17
AAGTA 5355365 3.002831 84.40045 4
GCACT 4652300 2.988449 50.75918 14
TGATG 6078510 2.894007 59.6167 14
GTGGA 6576270 2.8309648 45.231762 22
GTTGG 6634230 2.7675757 52.526245 21
TTTGG 5845075 2.6967866 51.30965 21
AACAT 3771325 2.5831366 63.368378 1
CCCAA 3107955 2.5165777 50.663197 10
AGAAC 4060250 2.5145404 48.450466 15
GTAGT 5160050 2.4567237 61.71051 5
CAGTC 3805800 2.4446917 14.8131895 42
AGTAG 4885620 2.4003139 62.46841 7
AGCTT 4093700 2.3808393 72.439545 2
GCTGT 4652895 2.3710675 47.081787 11
CTGAT 4040850 2.3501024 73.2114 13
ACTGA 3776800 2.2666473 75.10876 12
CAACG 3385545 2.2441537 59.206253 7
TCCCA 2844530 2.2320313 47.645874 9
GTAGA 4526925 2.2240863 41.098465 7
CAAGT 3698630 2.2197332 88.64477 3
GCTTG 4352355 2.2179153 60.326492 20
CACTA 2986470 2.189423 57.8048 15
GTTGA 4591995 2.1862702 54.435272 18
AGCTG 4115620 2.1642218 40.925102 2
TTGAC 3657840 2.127349 42.711563 19
AAAGC 3410565 2.112186 49.050323 11
AAGCA 3403130 2.1075816 48.96129 12
TTGTA 4000865 2.1067057 58.063103 13
TCAAG 3505225 2.1036615 88.38683 2
ACTAC 2866850 2.1017282 57.673008 16
ATCCA 2854565 2.0927217 87.42717 9
AGACT 3414765 2.049372 75.27499 10
GGTAG 4731100 2.0366528 56.08371 4
AGTTG 4260870 2.0286202 37.181534 9
TCAGA 3324655 1.9952924 76.61649 8
AGCAC 3008070 1.9939392 52.435066 13
TGACT 3428420 1.9939218 37.740417 20
CAGGA 3664580 1.9885503 81.48707 12
GGCTT 3878750 1.9765708 67.89934 19
CTGTT 3505720 1.9758111 56.467983 19
AGTAA 3521255 1.9744188 83.06667 5
AGGAT 4003235 1.9667964 72.755684 13
GTAAT 3614505 1.9640146 80.4949 6
CAGAC 2935665 1.9459445 82.88793 9
AAGCT 3213055 1.9283156 47.00241 1
TATCA 2893665 1.9206834 82.99907 6
TTATC 2973270 1.9124758 80.43738 5
ACTGG 3632800 1.9103281 33.73099 15
CAGTG 3614490 1.9006997 23.736444 18
AGGCT 3557450 1.8707049 61.18397 18
TAATC 2805275 1.8620142 79.22623 7
AGTCA 3091985 1.8556554 13.842384 43
CTACT 2611990 1.8556547 55.707054 17
CCTTG 2980625 1.8554088 56.580738 10
CTTAT 2869175 1.8455197 80.324524 4
GTTTG 3973070 1.8330859 46.57526 20
ATTCA 2751020 1.8260021 61.790035 4
GATGG 4197640 1.8070079 31.103403 21
ATCAG 3000575 1.8007957 75.13735 7
CCAGG 3083070 1.7906635 70.485306 11
TGCAC 2732175 1.7550386 48.623264 4
GGATA 3547835 1.7430576 72.75408 14
ATAGG 3520145 1.7294534 74.39355 16
TAGCT 2961545 1.7223936 72.27699 1
GATAG 3485565 1.7124642 74.29649 15
TCTGA 2932830 1.7056934 12.271815 18
TGTGG 4066160 1.6962641 22.338266 22
TCGGT 3309155 1.6863114 46.893982 15
TACCA 2300005 1.686166 40.26577 15
ATCCC 2139605 1.6788943 67.40314 8
TAGTA 3081630 1.6744661 70.37793 6
GCTTA 2872145 1.6703998 72.558266 3
CTTGT 2963745 1.670356 40.85934 8
TGAGG 3880045 1.6702889 55.623432 1
GATGT 3462630 1.6485742 59.63353 15
AACTG 2741435 1.6452727 46.66234 17
ATGTT 3121765 1.6438046 65.88245 16
AGGTA 3328130 1.6351162 67.794174 3
CATTC 2261075 1.6063519 66.020134 3
TAGTT 3023315 1.5919645 54.491573 18
AGTGG 3683110 1.585512 18.845778 16
GAGGT 3633400 1.5641128 60.411427 2
TCTCC 2039075 1.5505189 41.337166 1
CTGTC 2477755 1.5423774 57.42737 12
ACATT 2323600 1.5423 61.56017 2
TCAAC 2097305 1.5375639 66.428604 6
AAGAA 2656670 1.537182 46.26735 14
TACTT 2333355 1.5008678 46.089085 18
CAGAA 2422830 1.5004749 27.177988 12
TAGGC 2851970 1.4997244 61.95856 17
GTCAC 2309035 1.4832306 14.764519 44
AACTT 2231760 1.4813409 29.317474 15
ACCAG 2210435 1.4652164 35.96435 16
GCTGG 3122410 1.438676 21.70017 2
CAGTT 2473050 1.4382917 45.465157 8
GTAAA 2532520 1.4200207 40.026497 2
TAGAA 2531705 1.4195638 44.49952 8
AAAGT 2495835 1.3994509 46.488674 4
AACGC 2094605 1.3884369 59.283657 8
GCAGC 2374375 1.3790497 34.88634 17
TCCTT 2002120 1.3783829 24.846462 9
AACCC 1699995 1.3765224 44.3891 7
TGTAT 2607250 1.3728802 52.423935 14
CATAA 1980325 1.3564066 53.821808 1
AGAAA 2335250 1.3512044 48.914646 9
ACTGT 2307000 1.3417193 44.973495 18
CACTT 1879850 1.3355153 51.554966 6
CATCC 1701150 1.3348496 56.043076 7
ACATC 1810860 1.327567 52.387222 6
AGCAG 2445640 1.3271039 32.982418 16
AGTTT 2516870 1.3252895 38.791725 19
ACCCT 1687660 1.3242644 43.053467 8
CTGTG 2577960 1.3137019 26.847668 21
ACGCT 2037325 1.308695 57.374508 9
CTGCC 1885150 1.2961111 53.73673 4
ATAAA 2014255 1.2889903 50.37752 2
CCAAA 1686440 1.2758169 45.90129 11
AAACA 1804720 1.2755842 50.53193 4
ATAGT 2324385 1.2630018 53.128696 17
CTTTG 2239245 1.2620304 25.085335 17
CGCTG 2222265 1.2507788 50.377285 10
CTCCC 1487990 1.2497064 45.847225 2
TTTGT 2433900 1.2419578 23.306852 18
TTGTC 2193590 1.2362993 40.837048 9
GTATA 2265855 1.2311983 52.379696 15
TCACG 1910345 1.2271281 14.550616 45
ATTGT 2308935 1.2157987 40.19901 12
GCCTG 2155825 1.2133838 28.363169 17
TATAG 2218315 1.2053665 52.2281 16
ACTTT 1853005 1.1918957 27.73506 16
TATTG 2242705 1.1809247 27.612112 1
TAAAG 2065490 1.1581502 44.202534 3
TAAAC 1678220 1.1494824 48.835228 3
ATTGC 1965565 1.1431454 43.83276 2
GCCAG 1943355 1.1287109 45.324005 6
CAAAA 1594295 1.1268547 43.34535 12
CAGCT 1749620 1.1238849 41.211563 18
TTGCA 1922875 1.1183175 43.942326 3
GTCGG 2412525 1.1115906 42.489143 14
TGTCG 2177730 1.1097488 46.89066 13
GACTT 1897355 1.1034755 24.405647 21
TCCCG 1591375 1.0941299 34.79537 12
TGAAG 2226600 1.0939325 38.619034 12
TCAGT 1872635 1.0890987 27.762188 1
CGGTG 2360755 1.0877371 42.33069 16
GAAAG 2141825 1.0858709 40.523037 10
TTGAA 1998380 1.0858603 42.73648 11
ACAGT 1796935 1.0784308 21.44518 4
CCCTT 1417625 1.0779663 42.023685 9
CCAAC 1326090 1.0737635 44.370243 5
CAACC 1325460 1.0732534 44.348106 6
GATTG 2230500 1.0619515 36.60017 11
CCTGG 1885765 1.0613832 6.5912204 20
TTCTG 1880075 1.0596035 17.418512 16
TAGAT 1938590 1.0533723 40.77172 9
CTACA 1434845 1.051905 28.977386 9
TCACA 1423480 1.0435733 28.12296 2
CTGAG 1960055 1.0307059 5.788849 29
AGATT 1896440 1.0304692 40.884453 10
GCTGC 1830315 1.0301738 43.856503 3
GGCTG 2195085 1.0114032 20.639946 1
TGTAA 1850140 1.0053111 38.796253 1
CCTGT 1614345 1.0049134 30.25554 18
TGTAC 1716380 0.9982229 31.93902 13
GGTGA 2314735 0.99645144 37.57296 17
TGAGT 2082290 0.99138796 37.002243 19
CACAG 1493455 0.98995656 25.615238 3
AAAAG 1696460 0.9815926 35.272964 13
GAATC 1624205 0.97476697 36.494095 6
GAAGA 1905330 0.9659717 39.610146 13
CCCGG 1546480 0.9613755 31.4969 13
TGCTG 1871780 0.95383984 8.368623 16
TACAG 1563650 0.9384249 24.431097 10
CCAGA 1409215 0.93411696 28.471376 25
CGGAA 1677590 0.9103286 32.985508 4
TGTTT 1751390 0.8936902 7.4918413 19
CACGG 1537215 0.89282256 8.970633 45
CCGGC 1431235 0.889733 31.514126 14
GGCCT 1580285 0.88944703 28.663132 16
CGGCC 1426225 0.8866185 31.552427 15
GTACC 1379900 0.8863918 35.223045 14
GTCCC 1288850 0.88613254 34.83589 11
CTGAA 1463660 0.8784158 7.2097797 9
CCCCC 946400 0.87790346 16.216122 1
ACGGA 1602880 0.86978793 32.874416 3
TTTTG 1703430 0.8692174 15.706893 14
GGCTA 1650310 0.86782473 18.81263 9
TAGTG 1822720 0.86780554 21.458479 15
GTGAG 2008780 0.86474335 34.207523 18
TGGCT 1694330 0.86341304 18.55466 8
GCTAA 1405475 0.8434961 31.142086 10
ATCCT 1183105 0.84052175 32.904617 8
ATTGG 1739475 0.8281722 12.8145 16
CATTG 1422980 0.8275855 13.309696 1
TCCGA 1262625 0.8110592 29.433853 7
AACGG 1478030 0.80203927 32.816185 2
CTCCT 1042120 0.79243135 22.979046 10
TGTCC 1248925 0.7774432 30.952137 10
CAAAG 1248625 0.7732819 24.387798 1
TTACC 1068485 0.75909144 29.576939 22
GAAGC 1393655 0.75625396 26.185795 19
GGGTT 1789065 0.7463373 18.283232 19
TGTCT 1318930 0.7433442 13.049558 10
GTGCA 1409905 0.7414064 22.555428 4
AGTGT 1553810 0.73977613 16.847822 19
TATGG 1535305 0.7309659 6.3443093 21
AGTGC 1386195 0.7289384 22.516024 3
AGGTT 1528590 0.7277688 15.051196 18
ACAGA 1168585 0.72371256 26.719837 11
CTTGA 1239545 0.72090226 20.937937 11
GTCTG 1405770 0.71636593 10.044767 17
TTGTT 1401020 0.7149052 16.630842 19
TTGAT 1345670 0.7085794 21.528973 19
CCGAT 1097925 0.70526254 27.96212 8
GGTTT 1528195 0.7050751 11.263801 19
GACCT 1095245 0.703541 7.3777924 3
CATGG 1321790 0.6950706 5.0004206 21
CTTTT 1114505 0.6947008 18.935387 13
GCTTT 1232130 0.69442403 13.697875 20
CAGCA 1047065 0.6940609 23.299803 4
TAAAT 1116560 0.69242287 17.260368 11
GTGAT 1449220 0.6899804 9.269271 5
TGGTA 1440365 0.6857645 20.60612 12
TAGCA 1123355 0.67418176 28.639023 1
CCTAC 856845 0.67234474 13.793246 10
TTCAG 1147745 0.6675126 19.35828 10
AAAGA 1152490 0.6668449 17.504572 2
AGAAT 1182405 0.66299164 17.093872 4
CGGCT 1164615 0.6554915 5.4771943 45
GGTCC 1157980 0.651757 25.808195 5
GTTTC 1155660 0.6513258 5.993836 25
AAGTT 1190820 0.6470562 19.49585 13
ATCTG 1111680 0.6465377 6.309956 8
TAGGT 1357700 0.64640725 14.777071 17
CTATG 1102135 0.6409865 7.340816 4
GAGTT 1339095 0.63754934 22.370865 20
GGTTA 1339030 0.6375184 20.009188 20
ATTTG 1203460 0.6336971 8.638116 15
GTCCG 1116670 0.6285061 25.82205 6
AGTTC 1079300 0.627706 20.837494 14
ACGGC 1076680 0.6253414 6.9160876 45
GAGCT 1184050 0.6226393 6.250502 6
TCCTA 870180 0.6182083 12.522223 9
ATGGT 1289745 0.6140536 20.594872 11
CTGGT 1204005 0.6135486 24.046516 3
CGATG 1166255 0.6132817 22.9873 9
AGCTC 951770 0.61137843 7.934482 7
TGGTC 1180120 0.60137695 23.341743 4
TTCAC 846110 0.60110795 25.228945 1
CCCCG 784770 0.59594035 19.171417 10
TCTGG 1141120 0.58150303 6.496417 22
TGAAA 1035125 0.5804096 7.1214433 11
GTTAC 996965 0.57982105 24.283169 21
GGAAG 1287810 0.5720744 23.011482 18
CTGCT 917105 0.5708886 10.153514 8
TCCCC 666110 0.55944055 21.20284 9
CCTAT 777550 0.55240047 8.948281 5
CTAAG 917245 0.5504848 21.45625 11
TGGGT 1309635 0.54633534 18.033283 18
ACTCT 764400 0.54305816 6.811262 15
GTGGT 1286940 0.53686774 6.262786 15
GTGCT 1043400 0.53170586 8.253967 15
TAAGT 976980 0.5308619 19.415405 12
TTTCC 762885 0.5252171 7.0720315 8
GTTCT 928980 0.52356976 17.293358 15
TTGTG 1133215 0.52284 8.445631 13
CCCAG 735190 0.521605 7.6119156 15
CCTTT 756915 0.521107 20.802063 12
TTCCT 754425 0.5193927 7.0901823 9
TGACA 859695 0.51594615 6.8549013 14
CCCCA 593015 0.5139484 14.742962 3
TTATG 970395 0.5109737 5.706741 17
ATGAA 911105 0.5108698 9.830426 8
TAATT 845935 0.50837064 17.386137 7
CTGTA 865375 0.5032901 11.697893 19
GGGCT 1071900 0.49388665 13.231839 18
CCCAC 562760 0.48772728 14.099573 4
CCGAC 684020 0.48530078 17.935452 12
ACCCA 599210 0.48519316 8.674565 14
CTGAC 755020 0.4849943 7.2691126 1
CTCGC 700385 0.48154086 8.320364 26
GCCCA 678490 0.48137733 6.6632395 11
TGAAT 884200 0.480448 8.382426 9
CTCAC 608655 0.4775963 9.224556 9
GGTTG 1142005 0.47640574 10.731256 11
CCCGA 665240 0.4719767 17.95333 11
CGACT 732485 0.4705187 16.568975 13
GTGTT 1018395 0.46986473 6.155944 20
CGTGG 1010300 0.46550402 8.481036 21
AAATT 749110 0.46455264 10.158707 13
AAAAA 701035 0.46293584 6.2030206 7
GTTGT 1001485 0.46206287 11.849983 12
GTGGG 1223110 0.46134618 16.306765 17
TTTGA 875020 0.4607528 8.568453 16
GAGGC 968775 0.46061894 5.128039 19
CCACT 583680 0.45799905 12.736686 5
CACGT 711060 0.45675611 17.145586 7
GGTGG 1209150 0.4560806 5.1610003 6
ACCAT 621305 0.45548743 8.549833 5
TGAGC 864140 0.45441285 5.6936097 30
TCAGG 860130 0.45230415 15.727373 11
GGTCT 875605 0.44619924 11.765257 16
AAATA 697085 0.4460884 17.339487 12
AATTT 737335 0.44310668 9.848223 14
GTGGC 960505 0.44256055 16.952066 7
CACCA 545775 0.4419257 9.444544 4
AAATC 641865 0.43963993 8.025141 13
TTTCT 704580 0.43918353 6.7024035 26
CGCCT 638620 0.4390751 7.7331476 28
TCTGT 776785 0.43779323 12.580012 17
TGGAT 916360 0.43628326 6.2799444 17
TGACC 679000 0.43616205 7.317388 2
CGGTC 773005 0.43507782 12.930219 15
GTGTG 1041285 0.4343888 13.375151 20
GGATG 1008140 0.43398598 5.18159 18
CACTG 670860 0.43093327 10.573866 6
GGACT 817920 0.4301078 6.8688264 4
GCTGA 817700 0.42999214 6.801381 8
GTCTC 689420 0.42915696 14.331947 11
GATGA 872525 0.4286731 10.711226 7
AATTG 788055 0.42820567 11.176777 11
ACCTA 582325 0.42691064 8.305205 4
ATGAT 779350 0.42347562 5.3465285 5
CTCAG 657785 0.42253447 7.0377393 18
GCTCA 652945 0.41942543 7.879273 8
GCATT 715630 0.41620052 8.288573 1
CTTTA 645520 0.4152134 6.5696106 15
ATTGA 757295 0.4114916 11.192671 12
CGTAA 680405 0.4083452 15.98769 9
TGGTT 884290 0.40799168 5.931406 8
AATAT 650475 0.4033852 16.526733 13
GAAAT 715900 0.40141553 6.6906166 12
CTGGC 712965 0.40128496 9.017054 21
AAACC 527825 0.39930746 8.144423 12
TTTAT 683415 0.39799908 6.0400457 16
ATATT 660995 0.3972296 16.028038 14
GAAAC 639470 0.3960281 6.749908 11
GAGTG 914290 0.39358526 13.403812 20
CATCT 553870 0.3934898 6.8265424 7
TGGGC 844015 0.38888684 14.1237955 17
ACTGC 603070 0.38738772 10.482524 7
GCACG 662015 0.3845018 15.500649 6
TGATT 718285 0.378222 5.0001407 14
CACTC 477940 0.3750275 7.921799 14
GCACC 520450 0.3692506 8.4646845 3
ACGTA 613575 0.36823717 15.995595 8
GAGGA 828820 0.36818063 5.2919226 3
TTGGG 872895 0.36414212 13.101774 16
GTTTT 682685 0.34835696 5.8653216 20
GTAGG 806195 0.3470523 11.061841 8
TCGCC 504740 0.3470276 8.101012 27
TACCC 429605 0.33710024 5.587159 20
AGAGG 754270 0.33506384 5.3399086 1
CTAGA 556030 0.33370152 5.7358317 2
TGCTA 555240 0.3229199 9.41976 9
ATGCT 553785 0.3220737 6.6627407 6
GTACA 536195 0.32179755 6.400957 15
CTAAA 466510 0.319532 11.132562 11
TGGAC 603040 0.31711194 6.7868147 3
GATTT 600510 0.3162061 6.000547 15
AGTCT 540275 0.31421646 7.98515 14
ATACC 415650 0.30471888 5.7592607 19
GCGTG 660875 0.30450353 7.957606 20
GTTCA 521385 0.30323032 7.5736485 10
GCCTT 480740 0.2992558 5.380236 29
TTGGC 582570 0.2968716 9.711924 17
TATGA 545745 0.29654163 6.288263 7
TGTGC 579365 0.29523844 8.196152 14
GACAG 541640 0.2939159 6.2284536 15
CAGAG 540520 0.29330817 5.8723226 17
GGTTC 571850 0.29140884 6.4693727 9
AATCG 481280 0.2888403 6.8285704 14
AAGTG 581725 0.2858025 6.028544 3
ACAGC 429640 0.28479257 7.407184 16
TAGAC 473740 0.28431517 5.640587 3
TATGC 484855 0.28198496 6.653764 5
TCTGC 447080 0.27830276 6.920464 17
AGCCC 392240 0.27828774 7.4981003 10
CAGCC 388700 0.27577618 7.596281 17
TTGGT 596325 0.27513102 5.0646305 4
CGAGG 572925 0.27240604 5.6117163 2
AGACC 410755 0.27227443 6.259887 4
TCGAG 517680 0.27222493 6.2177186 1
GTCAG 505865 0.26601195 6.657771 13
CCATC 335210 0.2630309 7.4067698 6
GTCTA 446760 0.25982943 7.9194922 15
ACACT 352530 0.2584447 7.4232254 13
GCCTA 399335 0.25651664 6.842804 2
GGAGC 538770 0.25616646 5.6184344 5
ACTAG 426820 0.25615612 5.699076 1
CACAT 346365 0.25392506 5.7212286 7
ATCGG 478720 0.2517376 5.9908338 15
TGCCT 398765 0.24822716 6.982312 1
GCTCC 351255 0.24150094 5.345053 11
GGCGT 506695 0.23346384 8.364846 19
TGGCG 506490 0.23336938 8.148077 18
CTAGT 398915 0.23200345 6.597753 17
AAAAT 351155 0.22471605 5.9115334 9
AGCCT 349760 0.22467165 6.258594 18
TCTAG 382840 0.22265445 6.764059 16
CTAGC 335885 0.2157589 5.9570403 8
GAGTC 408840 0.2149908 6.6758723 11
AAGGC 392440 0.21295393 5.699444 18
AAGAT 368895 0.20684478 5.4528894 16
TGGAG 468475 0.20166999 5.5273576 9
GAAGG 451100 0.20038886 5.514395 17
AGAAG 393015 0.19925229 6.42557 16
AGGAG 446630 0.19840318 5.253057 4
TACAC 263755 0.19336252 7.3051248 12
GGAGT 435835 0.18761906 5.479414 10
TAAAA 293150 0.18759666 5.9722714 6
GCACA 274485 0.18194605 5.1973014 6
CGGTT 350725 0.17872582 5.4757843 17
TAGCC 272640 0.17513289 5.9556174 9
CCTAG 268855 0.17270157 5.962388 7
TGCAG 309920 0.16297318 5.0024385 15
ACATA 193745 0.13270396 5.0843806 8